MD Evidence Format Compatibility Matrix
Validated and candidate topology/trajectory formats for MD Evidence.
Confirmed public-alpha compatibility now includes PSF + DCD, PDB + DCD, and GRO + XTC. Other formats remain candidate paths until validated through live gates.
| Gate | Topology | Trajectory | Status |
|---|---|---|---|
| Public AdK single-job gate | PSF | DCD | PASS |
| Public AdK 5-job gate | PSF | DCD | PASS |
| Public AdK 10-job gate | PSF | DCD | PASS |
| Researcher-style browser upload gate | PSF | DCD | PASS |
| PDB + DCD format compatibility gate | PDB | DCD | PASS |
| GRO + XTC format compatibility gate | GRO | XTC | PASS |
Confirmed paths
- PSF + DCD
- PDB + DCD
- GRO + XTC
- Metadata: JSON
Candidate paths not yet validated
- PDB + XTC
- PRMTOP + NetCDF
- TPR + XTC/TRR
- TRR trajectory path
- Ligand systems
- Membrane systems
- Very large trajectories
- Multipart upload above single-upload limit
Latest format gate
The GRO + XTC gate completed with 3/3 files, 0 failures, 100 frames, 3,341 atoms, 214 residues, and descriptive RMSD/RMSF/Rg summaries.
Scope notes
Format compatibility validates parsing and descriptive metrics only. It does not validate biological interpretation, regulated use, or downstream scientific conclusions, or regulated decision support.